Selected Recent Publications
See all of Dr. El Haddad's publications in PubMed
“Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality”
Gygi JP, Maguire C, Patel RK, Shinde P, Konstorum A, Shannon CP, Xu L, Hoch A, Jayavelu ND, Haddad EK; IMPACC Network; Reed EF, Kraft M, McComsey GA, Metcalf JP, Ozonoff A, Esserman D, Cairns CB, Rouphael N, Bosinger SE, Kim-Schulze S, Krammer F, Rosen LB, van Bakel H, Wilson M, Eckalbar WL, Maecker HT, Langelier CR, Steen H, Altman MC, Montgomery RR, Levy O, Melamed E, Pulendran B, Diray-Arce J, Smolen KK, Fragiadakis GK, Becker PM, Sekaly RP, Ehrlich LI, Fourati S, Peters B, Kleinstein SH, Guan L
Clinical Trial J Clin Invest. 2024 May 1;134(9):e176640. doi: 10.1172/JCI176640
“Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology”
Phan HV, Tsitsiklis A, Maguire CP, Haddad EK, Becker PM, Kim-Schulze S, Lee B, Chen J, Hoch A, Pickering H, van Zalm P, Altman MC, Augustine AD, Calfee CS, Bosinger S, Cairns CB, Eckalbar W, Guan L, Jayavelu ND, Kleinstein SH, Krammer F, Maecker HT, Ozonoff A, Peters B, Rouphael N; IMPACC Network; Montgomery RR, Reed E, Schaenman J, Steen H, Levy O, Diray-Arce J, Langelier CR
Multicenter Study Sci Transl Med. 2024 Apr 17;16(743):eadj5154. doi: 10.1126/scitranslmed.adj5154. Epub 2024 Apr 17
“A follicular regulatory Innate Lymphoid Cell population impairs interactions between germinal center Tfh and B cells”
MH O'Connor, R Muir, M Chakhtoura, M Fang, E Moysi, S Moir, AJ Carey, A Terk, CN Nichols, T Metcalf, C Petrovas, MJ Cameron, V Tardif, EK Haddad
Communications Biology. PMID: 33980982 DOI: 10.1038/s42003-021-02079-0 (May 12, 2021)
"Adenosine deaminase-1 delineates human follicular helper T cell function and is altered with HIV"
Tardif V, Muir R, Cubas R, Chakhtoura M, Wilkinson P, Metcalf T, Herro R, Haddad EK
Nat Commun.;10(1):823, Feb 18, 2019
"Human Monocyte Subsets Are Transcriptionally and Functionally Altered in Aging in Response to Pattern Recognition Receptor Agonists"
Metcalf TU, Wilkinson PA, Cameron MJ, Ghneim K, Chiang C, Wertheimer AM, Hiscott JB, Nikolich-Zugich J, Haddad EK
J Immunol. 2017 Jul 10
"A Novel Agonist of the TRIF Pathway Induces a Cellular State Refractory to Replication of Zika, Chikungunya, and Dengue Viruses"
Pryke KM, Abraham J, Sali TM, Gall BJ, Archer I, Liu A, Bambina S, Baird J, Gough M, Chakhtoura M, Haddad EK, Kirby IT, Nilsen A, Streblow DN, Hirsch AJ, Smith JL, DeFilippis VR
MBio. 2017 May 2;8(3)
"Delayed differentiation of potent effector CD8+ T cells reducing viremia and reservoir seeding in acute HIV infection"
Takata H, Buranapraditkun S, Kessing C, Fletcher JL, Muir R, Tardif V, Cartwright P, Vandergeeten C, Bakeman W, Nichols CN, Pinyakorn S, Hansasuta P, Kroon E, Chalermchai T, O'Connell R, Kim J, Phanuphak N, Robb ML, Michael NL, Chomont N, Haddad EK, Ananworanich J, Trautmann, RV254/SEARCH010 and the RV304/SEARCH013 Study Groups
Sci Transl Med. 2017 Feb 15;9(377)
"Circulating CXCR5+CXCR3+PD-1lo Tfh-like cells in HIV-1 controllers with neutralizing antibody breadth"
Martin-Gayo E, Cronin J, Hickman T, Ouyang Z, Lindqvist M, Kolb KE, Schulze Zur Wiesch J, Cubas R, Porichis F, Shalek AK, van Lunzen J, Haddad EK, Walker BD, Kaufmann DE, Lichterfeld M, Yu XG
JCI Insight. 2017 Jan 26;2(2)
"Altered Memory Circulating T Follicular Helper-B cell Interaction in Early Acute HIV Infection"
Roshell Muir, Talibah Metcalf, Virginie Tardif, Hiroshi Takata, Nittaya Phanuphak, Eugene Kroon, Donn J Colby, Rapee Trichavaroj, Victor Valcour, Merlin L Robb, Jintanat Ananworanich, Lydie Trautmann, and Elias K Haddad, on behalf of the RV254/SEARCH010 and RV304/SEARCH 013 Study Groups
PLoS Pathog. 2016 Jul 27;12(7)
"HCV RNA Activates APCs via TLR7/TLR8 While Virus Selectively Stimulates Macrophages Without Inducing Antiviral Responses"
Zhang Y, El-Far M, Dupuy FP, Abdel-Hakeem MS, He Z, Procopio FA, Shi Y, Haddad EK, Ancuta P, Sekaly RP, Said EA
Sci Rep. 2016 Jul 7;6:29447. doi: 10.1038/srep29447
"An age-related population of human memory T cells masquerade as naïve T cells and respond to persistent infections in humans"
Vesna Pulko, John S. Davies, Carmine Martinez , Marion C. Lanteri, Michael P. Busch, Michael S. Diamond, Kenneth Knox, Erin S. Busch, Peter A. Sims, Shripad Sinari, Dean Billheimer, Elias K. Haddad, Kristy O. Murray, Anne M. Wertheimer and Janko Nikolich-Žugich
Nat Immunol. 2016 Aug;17(8):966-75
"A Numerically Subdominant CD8 T Cell Response to Matrix Protein of Respiratory Syncytial Virus Controls Infection with Limited Immunopathology"
Liu J, Haddad EK, Marceau J, Morabito KM, Rao SS, Filali-Mouhim A, Sekaly RP, Graham BS
PLoS Pathog. 2016 Mar 4;12(3)
"Enhancement of Microbiota in Healthy Macaques Results in Beneficial Modulation of Mucosal and Systemic Immune Function"
Manuzak JA, Hensley-McBain T, Zevin AS, Miller C, Cubas R, Agricola B, Gile J, Richert-Spuhler L, Patilea G, Estes JD, Langevin S, Reeves RK, Haddad EK, Klatt NR
J Immunol. 2016 Mar 1;196(5):2401-9
"Age-Dependent Cell Trafficking Defects in Draining Lymph Nodes Impair Adaptive Immunity and Control of West Nile Virus Infection"
Richner JM, Gmyrek GB, Govero J, Tu Y, van der Windt GJ, Metcalf TU, Haddad EK, Textor J, Miller MJ, Diamond MS
PLoS Pathog. 2015 Jul 23;11(7) PMID: 26204259
"Reversible Reprogramming of follicular helper T cells during HIV infection"
R Cubas, J van Grevenynghe, S Wills, BH Santich, CM Buckner, F Procopio, Z He, T Metcalf, K Ghneim, M Locci, P Ancuta, JP Routy, L Trautmann, RA Koup, C Petrovas, S Migueles, M Connors, GD Tomaras, S Moir, S Crotty, EK Haddad
J Immunol. 2015 Dec 15;195(12):5625-36
"BCL6 orchestrates Tfh cell differentiation via multiple distinct mechanisms"
Hatzi K, Nance JP, Kroenke MA, Bothwell M, Haddad EK, Melnick A, Crotty S
J Exp Med. 2015 Apr 6;212(4):539-53
Global analyses revealed age-related alterations in innate immune responses after stimulation of pathogen recognition receptors.
Metcalf TU, Cubas RA, Ghneim K, Cartwright MJ, Grevenynghe JV, Richner JM, Olagnier DP, Wilkinson PA, Cameron MJ, Park BS, Hiscott JB, Diamond MS, Wertheimer AM, Nikolich-Zugich J, Haddad EK
Aging Cell. 2015 Jun;14(3):421-32
"Immune activation alters cellular and humoral responses to yellow fever 17D vaccine"
Muyanja E, Ssemaganda A, Ngauv P, Cubas R, Perrin H, Srinivasan D, Canderan G, Lawson B, Kopycinski J, Graham AS, Rowe DK, Smith MJ, Isern S, Michael S, Silvestri G, Vanderford TH, Castro E, Pantaleo G, Singer J, Gillmour J, Kiwanuka N, Nanvubya A, Schmidt C, Birungi J, Cox J, Haddad EK, Kaleebu P, Fast P, Sekaly RP, Trautmann L
J Clin Invest. 2014 Jul 1;124(7):3147-58
"Myeloid Dendritic Cells Induce HIV-1 Latency in Non-proliferating CD4(+) T Cells"
Pantel A, Teixeira A, Haddad E, Wood EG, Steinman RM, Longhi MP. Direct Type I IFN but Not MDA5/TLR3 Activation of Dendritic Cells Is Required for Maturation and Metabolic Shift to Glycolysis after Poly IC Stimulation. PLoS Biol. 2014 Jan;12(1):e1001759. Evans VA, Kumar N, Filali A, Procopio FA, Yegorov O, Goulet JP, Saleh S, Haddad EK, da Fonseca Pereira C, Ellenberg PC, Sekaly RP, Cameron PU, Lewin SR
PLoS Pathog. 2013 Dec;9(12):e1003799
"Human Circulating PD-1(+)CXCR3(-)CXCR5(+) Memory Tfh Cells Are Highly Functional and Correlate with Broadly Neutralizing HIV Antibody Responses"
Locci M, Havenar-Daughton C, Landais E, Wu J, Kroenke MA, Arlehamn CL, Su LF, Cubas R, Davis MM, Sette A, Haddad EK; International AIDS Vaccine Initiative Protocol C Principal Investigators, Poignard P, Crotty S
Immunity. 2013 Oct 17;39(4):758-69
"Systems Analysis of a RIG-I Agonist Inducing Broad Spectrum Inhibition of Virus Infectivity"
Goulet ML, Olagnier D, Xu Z, Paz S, Belgnaoui SM, Lafferty EI, Janelle V, Arguello M, Paquet M, Ghneim K, Richards S, Smith A, Wilkinson P, Cameron M, Kalinke U, Qureshi S, Lamarre A, Haddad EK, Sekaly RP, Peri S, Balachandran S, Lin R, Hiscott J
PLoS Pathog. 2013 Apr;9(4):e1003298
"Inadequate T follicular cell help impairs B cell immunity during HIV infection"
Cubas RA, Mudd JC, Savoye AL, Perreau M, van Grevenynghe J, Metcalf T, Connick E, Meditz A, Freeman GJ, Abesada-Terk G Jr, Jacobson JM, Brooks AD, Crotty S, Estes JD, Pantaleo G, Lederman MM, and Haddad EK
Nat Med. 2013 Apr;19(4):494-9
"Impaired T-cell responses to sphingosine-1-phosphate in HIV-1 infected lymph nodes"
Mudd JC, Murphy P, Manion M, Debernardo R, Hardacre J, Ammori J, Hardy GA, Harding CV, Mahabaleshwar GH, Jain MK, Jacobson JM, Brooks AD, Lewis S, Schacker TW, Anderson J, Haddad EK, Cubas RA, Rodriguez B, Sieg SF, Lederman MM
Blood. 2013 Apr 11;121(15):2914-22
"Probiotic/prebiotic supplementation of antiretrovirals improves gastrointestinal immunity in SIV-infected macaques"
Klatt NR, Canary LA, Sun X, Vinton CL, Funderburg NT, Morcock DR, Quiñones M, Deming CB, Perkins M, Hazuda DJ, Miller MD, Lederman MM, Segre JA, Lifson JD, Haddad EK, Estes JD, Brenchley JM
J Clin Invest. 2013 Feb 1;123(2):903-7
"Follicular helper T cells serve as the major CD4 T cell compartment for HIV-1 infection, replication, and production"
Perreau M, Savoye AL, De Crignis E, Corpataux JM, Cubas R, Haddad EK, De Leval L, Graziosi C, Pantaleo G
J Exp Med. 2013 Jan 14;210(1):143-56