Recent Selected Publications
"Does the Terminologia Anatomica Really Matter?" [Viewpoint Article]
Clin. Anat. 24: 503-504 (2011).
"Efficient computation of enclosed volume and surface area from the same triangulated surface representation"
Nyström, I., Grevera, G., Hirsch, B.E., and Udupa, J.K.
Comp. Med. Imaging Graph. 35: 460-471 (2011).
"Clinical anatomy of quadriceps femoris and the extensor apparatus of the knee"
Waligora, A.C., Johanson, N.A., and Hirsch, B.E.
Clin. Orthop. Rel. Res. 467: 3297- 3306 (2009).
"The application of 3D image processing to studies of the musculoskeletal system"
Hirsch, B.E., Udupa, J.K., Siegler, S., and Winkelstein, B.A.
In MIPPR 2009: Medical Imaging, Parallel Processing of Images, and Optimization Techniques, edited by Jianguo Liu,
Kunio Doi, Aaron Fenster, S. C. Chan, Proceedings of SPIE Vol. 7497: 74971B-1 – 74971B-6. Bellingham, WA: SPIE (2009).
"Rigid model-based 3D segmentation of the bones of joints in MR and CT images for motion analysis"
Liu JK, Udupa JK, Saha PK, Odhner D, Hirsch BE, Siegler S, Simon S, and Winkelstein BA
Med. Phys. 35: 3637-3649 (2008).
"A framework for evaluating image segmentation algorithms"
Udupa JK, Leblanc VR, Zhuge Y, Imielinska C, Schmidt H, Currie LM, Hirsch BE, and Woodburn J
Comput. Med. Imaging Graph. 30:75-87 (2006).
"The effect of ankle ligament damage and surgical reconstructions on the mechanics of the ankle and subtalar joints revealed by three dimensional stress MRI (3D sMRI)"
Ringleb SI, Udupa JK, Siegler S, Imhauser CW, Hirsch BE, Liu J, Odhner, D., Saha PK, Okereke E, Roach N
J. Orthop. Res. 23: 743-749 (2005).
"Model-based 3D segmentation of the bones of joints in medical images"
Liu J, Udupa JK, Saha PK, Odhner D, Hirsch BE, Siegler S, Simon S, Winkelstein BA
Proceedings of SPIE: Medical Imaging, Volume 5747, pp. 1793-1803 (2005).
"Mechanics of the ankle and subtalar joints revealed through a 3D quasi-static stress MRI technique"
Siegler S, Udupa, JK, Ringleb SI, Imhauser CW, Hirsch BE, Odhner D, Saha PK, Okereke E, and Roach N
J. Biomech., 38: 567-578 (2005).
"3D stress MRI for studying the functional pathologies of the ankle complex"
Udupa JK, Siegler S, Hirsch BE, Ringleb SI, Okereke E, Roach N, Imhauser CW, Odhner D, Liu J, and Saha PK
Medical Imaging 2004: Physiology, Function, and Structure from Medical Images, Proc. SPIE 5369: 722-729 (2004).
"Iso-shaping rigid bodies for estimating their motion from image sequences"
Saha PK, Udupa JK, Falcão AX, Hirsch BE, and Siegler S
IEEE Trans. Med. Imaging, 23: 63-72 (2004).
"Model-based 3D segmentation of the bones of the ankle and subtalar joints in MR images"
Liu J, Udupa JK, Saha PK, Odhner PK, Hirsch BE, and Siegler S
SPIE 5032: 1650-1657 (2003).
"Area of and volume enclosed by digital and triangulated surfaces"
Nystroem I, Udupa JK, Grevera GJ, and Hirsch BE
Medical Imaging 2002: Visualization, Image-Guided Procedures, and Display, Proc. SPIE 4681: 669-680 (2002).
"Iso-shaping Rigid Bodies for estimating their motion from image sequences"
Saha P, Udupa JK, and Hirsch BE
Medical Imaging 2002: Image Processing, SPIE 4684: 343-352 (2002).
"The geometric architecture of the subtalar and midtarsal joints in rheumatoid arthritis based on magnetic resonance imaging"
Woodburn J, Udupa JK, Hirsch BE, Wakefield RJ, Helliwell PS, Reay M, O’Connor P, Budgen A, and Emery P
Arthritis Rheum, 46: 3168-3177 (2002).
"An in vivo analysis of the motion of the peri-talar joint complex based on MR imaging"
Stindel E, Udupa JK, Hirsch BE, and Odhner D
IEEE Transac. Biomed. Eng. 48: 236-247 (2001).
"Pennation angles of the intrinsic muscles of the foot"
Ledoux WR, Hirsch BE, Church T, and Caunin M
J. Biomechanics 34: 399-403 (2001).